SLIDES & TRANSCRIPTS
APRIL 29, 2002

Breakout Session A: Etiology/Molecular Biology/Pathology

John M. Bennett, MD
Peter Valent, MD

OPENING REMARKS BY DR. BENNETT

Session agenda and rationale:

· To develop a "shopping list" of criteria to be incorporated into any MPD study   (phase II, III)

   - Especially pertinent to diagnostic section of protocols that defines entry      criteria/diagnostic criteria and methods for forwarding specimens for testing.
   - These criteria will enable us to determine what kinds of studies can result from      materials submitted to reference labs for flow cytometry, morphology/pathology,      molecular genetics, and/or cytogenetics testing.

· Identify the reference labs, how to get information to them, and what funding   mechanisms should be in place - new and established ones - to support reference   laboratories in future MPD studies.

  Existing diagnostic criteria for mastocytosis:

· Over the past four years, well-accepted criteria have been developed to distinguish   the MPDs, a very diverse group, from each other.

· Excellent criteria to separate Ph+ from Ph- disease in CML

· Common links exist among the different criteria.
   - e.g., degrees of fibrosis among the MPDs
   - e.g., mast cell disorders among the MPDs
   - e.g., each disorder can spontaneously progress to acute myelod leukemia, or      "secondary AML"

SYSTEMIC MAST CELL DISEASE (SMCD): ETIOLOGY/MOLECULAR BIOLOGY/PATHOLOGY

Overview of mastocytosis
Dr. Peter Valent posed a list of questions to participants:

1. Do we have sufficient diagnostic criteria for mastocytosis and its subtypes?
     - He believes the WHO diagnostic criteria are fine and represent a major step        forward.
2. What is the exact place of mastocytosis within the group of myeloid     malignancies?
     - Over last few years, the hypothesis that systemic mastocytosis is indeed a        MPD has been strongly supported, particularly by Dr. Cem Akin's data from Dr.        Dean Metcalfe's lab.

Overview of mastocytosis.
· Most patients follow indolent course; but some may have associated hematologic   disorders (MDS, MPDs)

· Associated with activating mutations in c-kit, the receptor for stem cell factor, the   most important cytokine for growth and differentiation of mast cells.

Mastocytosis Consensus Classification (established 2000)
· Published in July 2001 Leukemia Research

· Adopted by WHO

· Seven subtypes

· Most commonly encountered subtypes: cutaneous mastocytosis and indolent   systemic mastocytosis

· New, provisional addition is "smoldering systemic mastocytosis":
   - Patients with indolent systemic mastocytosis with increased mast cell burden      who may be progressing to more aggressive subtypes.
   - Hepatosplenomegaly, increased tryptase levels and surrogate markers of      disease.
   - No definite evidence of MDS/MPD.

Similarity of mastocytosis to MPDs denoted by c-kit mutation in pre-pro-B cells

Dr. Cem Akin presented data on clonality in mastocytosis:
· mRNA studies are not sufficient to determine role of progenitor cells in   mastocytosis because mRNA does not give us information about cell lineage.

· Study by Dr. Akin's group addressing cell lineage question:
   - Detected c-kit mutation in patients with extensive mast cell disease at single-cell      level:
       * In peripheral B cells and monocytes
       * Not in peripheral T cells
   - Found that adenine was replaced by thymidine in heterozygous manner in c-kit.
   - Found that Ig gene arrangement suggesting B cells were polyclonal.
   - Conclusions of study:
       * c-kit mutation in B cells in patients with extensive mastocytosis occurred at a          stage earlier than the pro-B cell stage.
       * B cells in patients with extensive mastocytosis are polyclonal but express the          c-kit mutation.
       * Data supported hypothesis that mastocytosis, especially smoldering subtype          of indolent systemic mastocytosis:
           · Is a disorder of the hematopoietic progenitor cells of B cells and myeloid               cells.
           · Bears striking resemblance to the other MPDs in etiology and               pathogenesis.

· Studies of other MPDs have also supported the hypothesis that B cells are involved   in the clonal process in these disorders; but, these studies have been conducted   only in a limited number of patients:
   - Dr. Ayalew Tefferi: 30% of CML cases in 12-year-old study had B cells      demonstrating BCR/ABL fusion signal by D-FISH, with some involvement of T      cells as well.
   - Dr. Tefferi: X-linked DNA analysis in patients with ET, PV, etc. showed      involvement of B and T cells, even at cytogenetic level. A very small study in MF      using X-linked DNA analysis also suggested involvement of B cells.
   - In original Ph PV study in Seattle, a population of clonal B cells was identified.
   - Dr. Valent: B cells and myeloid cells in 20-year-old CML study were clonal,      whereas most of the peripheral T cells were not. Same holds true blast crisis      CML (mostly myeloid, 20-30% B cell, rarely T cell).

· Consensus:
   - B cell lineage clonality has been demonstrated in mastocytosis as well as in      Ph+ CML.

· Recommendation:
   - Expand number of patients with MPDs in studies looking for clonality outside of      the myeloid lineage (esp. B cells). These should be confirmative studies. Dr.      Valent commented that this recommendation should be extended to include a      diagnostic aspect.

General discussion on c-kit mutation in mastocytosis

· c-kit mutations in mastocytosis affect codon 816 in the tyrosine kinase domain of   the molecule, most commonly D816Y.
   - Cause ligand-independent autophosphorylation of the tyrosine kinase function of      the receptor and growth factor independence.
   - Demonstrated in lesional mast cells, mostly in adult onset disease.

· Question: Would the presence of the c-kit mutation be a reliable indication of   subtype diagnosis, e.g., of smoldering mastocytosis?
   - Response: No. Patients with non-mast cell clonal disorders have had the c-kit      mutation detected in their peripheral blood.

· Mast cell disorder is the only MPD in which a c-kit mutation has been detected.

· It is to early to estimate the proportion of each MPD carrying the c-kit mutation.

· c-kit detection is an issue of clonal expansion and disordered cell migration.
   - The larger the clone expands, the more likely you are to find it in bone marrow,      and then in peripheral blood.
   - It really depends on which cells you examine for the c-kit mutation. Some cells      offer higher sensitivity for detecting the mutation than others (e.g., marrow versus      skin).
   - Collections of mast cells in marrow and skin are not only the result of clonal      expansion, but also of disordered cell migration.
       * CD34+ cells with c-kit mutation were observed to migrate more rapidly to           stem cell factor.

Opportunities for chromosomal research in mastocytosis

· No consistent or distinct chromosomal abnormality has been found in the mast cell   proliferative disorders.

· Question: Perhaps chromosomal research is an area for further research in   mastocytosis, using current molecular techniques, such as simultaneous staining   of cells with fluorescent-labeled CD34+ and application of FISH?
   - Response: It is difficult to determine abnormalities in mast cells for two reasons:
       * mast cells do not divide rapidly
       * mast cells represent a very minor fraction of the bone marrow. (<1% of bone          marrow mononuclear cells even in mastocytosis)
   - Chromosomal studies on mast cells were nevertheless urged by one investigator    in the room, including use of interphase FISH using a variety of probes, starting    with c-kit. He said he strongly suspected that the c-kit mutation is probably a    secondary anomaly, and not the BCR/ABL fusion of CML.

· Question: Do we have any cytogenetic data on mast cell leukemia?
   - Response: It's very rare - only one patient in last five years. (Dr. Valent)

SMCD THERAPIES

· Question: Would the c-kit mutation potentially be amenable to Gleevec and other   tyrosine kinase inhibitors?
   - Response: No, STI571/Gleevec has been shown to be ineffective in targeting the      specific c-kit mutation associated with myeloproliferative disorders. This has      been demonstrated both in in vitro phosphorylation experiments and in clinical      studies in systemic mastocytosis patients. The c-kit mutation is on a different      domain of the molecule than in GI stromal tumors.

· Standard therapy in mastocytosis.
   - No standard therapy or standard cytoreductive therapy exists in mastocytosis.
   - IFN-alpha 2B and prednisolone are the only drugs with reported beneficial effect      in systemic mastocytosis of the aggressive type.
   - Recommendations:
       * We must establish a standard therapy in mastocytosis, particularly in          aggressive mastocytosis.
       * Urgent question: Should we conduct a trial employing interferon-alpha +/-          prednisolone to establish this treatment as standard therapy?

· Novel therapies in mastocytosis.
   - The subject of anti-angiogenesis/anti-fibrosis agents was broached, but then      tabled until the session on MF.
   - How are mast cells isolated from monoclonals in the absence of any specific      markers for mast cells?
       * Presence of high-affinity IgE receptor (not unique: basophils have this also)
       * Presence of kit on surface (not unique: other cells are kit +)
       * Presence of tryptase within mast cell granules (not specific either)
       * CD34- (exclude the CD34+ cells since these cells co-express c-kit)
       * CD45+
       * Neoplastic mast cells can be isolated from normal mast cells by:
          · Applying antibodies against CD25+
          · Applying antibodies against CD2+

· Developing response criteria for trials of anti-mastocytosis agents is crucial.
   - Clinical response criteria will be an important component of these criteria.
   - Drs. Akin and Valent are involved in developing response criteria for studies of      anti-mastocytosis agents.


DIAGNOSTIC CRITERIA IN ESSENTIAL THROMBOCYTOSIS (ET):
TRUE VS. FALSE ET

Dr. Juergen Thiele presented evidence from slide reviews showing superiority of WHO's histologically strong diagnostic criteria over the histologically weak PVSG criteria in distinguishing true ET from false ET (usually early fibrosis/IMF).

· Proportion of true ET patients among those diagnosed with ET depends on which   criteria are used :
   - PVSG (weak histological emphasis)
   - WHO (strong histological emphasis)

· Review of slides of bone marrow pathology and clinical records from retrospective,   multi-center observational study on Ph- chronic MPD patients with platelet count of   at least 600,000.
   - Per updated PVSG: only 76.6% of patients diagnosed with ET were true ET
   - Per WHO criteria: 33.5 % of patients diagnosed with ET were true ET patients

· Megakaryocyte nuclear morphology is a hallmark WHO criterion for distinguising   true ET from false ET (usually IMF with thrombocythemia) :
   - False ET: Bulky, bulbous, atypical MK nuclei.
   - True ET: Nicely lobulated MK nuclei.

· Clustering is also a hallmark criterion:
   - False ET: dense clustering
   - True ET: loose clustering.

· Review of 403 slides of patients diagnosed with ET in ongoing British UKPT1 study.
   - Per Dr. Thiele's blinded review: only 21% true ET.
   - Per pathologist re-review using histological criteria: 19% true ET.
   - Per second pathologist's re-review using histological criteria: 20% true ET.
   - Most of the patients were IMF.

· Histology, esp. via CD61 staining, greatly facilitates correct diagnosis of true ET.

· Diagnosis-specific outcomes in true vs. false ET :
   - It is very important to distinguish between true and false ET when examining      outcomes.
   - Myelofibrosis as outcome:
       * Most true ET patients do not progress to MF.
       * Most false ET patients (pre-fibrotic IMF) progress to MF.
   - Survival as outcome:
       * PVSG vs.WHO criteria predict a tremendous difference in survival.
       * Per PVSG criteria:
          · 16.5% loss of life expectancy in Ph- ET.
       * Per WHO criteria:
          · Negligible loss of life expectancy in true ET.
          · Real loss of life expectancy in false ET.

· Dr. Thiele's recommendations:
   - For any trial, ongoing or retrospective, include histopathology as one of the major      points of diagnosis. This means you must perform pre-treatment representative      bone marrow biopsies as part of diagnosis.
   - Use WHO diagnostic criteria, which emphasize histopathology to arrive at a      more accurate classification of the myeloproliferative disorders.
   - You can teach these differences (e.g., MK nuclei morphology and clustering) to      normal pathologists and technicians interested in morphology on H&E slides. It's      very learnable. You must, however, use some kind of fiber staining.

· Dr. Bennett's recommendations:
   - Three things are needed to distinguish true ET from false ET pathologically:
       * Very good, readable bone marrow biopsy.
       * Good visualization, in order to recognize morphological differences of nuclei in          megakaryocytes, not cytoplasm (cytoplasm will be positive for markers          anyway).
       * The degree/presence/absence of fibrosis as determined by reticulin fiber stain,          as well as amount of fat involved.

· Recommendations from discussion of using histopathology in diagnosing and   prognosticating ET:
   - There was general consensus to develop some sort of publishable      syllabus/manual with pictures to describe to pathologists and technicians the      minimum criteria for performing the above recommended histopathology (bone      marrow biopsy, megakaryocyte morphology, fiber staining, etc.).
       * Dr. Heike Pahl mentioned that German pathologists, headed by Dr. Thiele, are          now developing such a consensus pathology.
       * Dr. Bennett said it would be great to have that consensus translated for use in          studies in the U.S.
       * Dr. Tefferi did caution that we first need to reproduce Dr. Thiele's findings          before developing such a syllabus.
       * Dr. Richard Silver maintained that clinical hematologists have a duty to teach          our colleagues to use this biopsy technique. Dr. Bennett asserted that the          only way to address the question of megakaryocyte morphology in diagnosing          ET would be the establishment of a specific hematopathology committee.
       * Committee would seek to reproduce Dr. Thiele's results via a formal,          prospective study involving exchange of slides.
       * This study would form part of any clinical trial involving ET.
       * Committee would include clinicians.
   - Dr. Silver urged that Dr. Thiele's method should made part of the diagnosis of      every patient with an MPD. (Thiele's criteria)

· Other discussion of using histopathology in diagnosing and prognosticating ET:
   - Widespread resistance and skepticism of examining bone marrow biopsy in U.S.      and Europe for diagnosis of the MPDs.
       * Histology in the U.S. is still suboptimal, despite innumerable tutorials.
       * Unfortunately, this bone marrow biopsy technique is rarely and poorly done in          the U.S. (e.g., big Novardis Gleevec trial, in which <50% of sophisticated          investigators did bone marrow biopsies to evaluate marrow cellularity).
       * The vast majority of American hematologists were trained using the PVSG          criteria, which explicitly said that the details of the bone marrow biopsy were          irrelevant. Therefore, expect to encounter resistance when requesting this level          of care from pathologists in examining bone marrow biopsies. It is very difficult          to convince hematopathologists to reproduce this kind of work.
       * In Europe, the importance of bone marrow biopsy morphology was greeted          with much skepticism four years ago at a European MPD conference, until a          clinician (Dr. Silver) vouched for the veracity of Dr. Thiele's findings.
       * At conference in Italy five years ago, however, pathologists agreed that one         diagnostic criterion for MF should be megakaryocyte morphology of bone         marrow, in particular the presence of clusters of MKs.
   - Drs. Giovanni Barosi and Thiele discussed the importance of establishing a      histological pattern based on several criteria.
       * Dr. Barosi warned that, of 300 patients in Italian MF registry, sensitivity of the          MK clusters is no more than 60%.
       * Dr. Thiele said yes, there are many other criteria. Clustering is only one of 20          criteria. He further pointed out that the density of the clustering is also          important, with loose clustering of megakaryocytes characteristic of true ET.
       * Dr. Thiele did stress that one of the most important hallmarks is the bulky          nuclei of the megakaryocytes in false ET.
   - Retrospective vs. prospective studies
       * A retrospective study would require a different format of funding, i.e.,          submission of a grant proposal.
       * Dr. Bennett pointed out that reproducing results regarding value of          megakaryocyte morphology must be done prospectively. Otherwise, we lose          the ability to know who is truly ET from onset.
       * Others maintained that prospective studies are a good idea, especially given          the multitude of other questions that need addressing.
       * Dr. Tefferi expressed concern that prospective studies would take too long,          since this disease takes 10-20 years to progress. He urged that there is still          value in retrospective studies, that the bone marrows do not change.
   - Dr. Silver urged that the diagnostic bone marrow be examined.

DIAGNOSTIC CRITERIA IN POLYCYTHEMIA VERA (PV): PRV1 AS MARKER

Dr. Heike Pahl briefed participants on the progress of investigations by the Germans into polycythemia rubra vera 1 (PRV1), a gene whose protein travels on the granulocyte and whose mRNA is a potential marker for PV.

· The Germans have established a quantitative RT-PCR assay demonstrating   overexpression of the PRV1 mRNA in PV patients:

· PRV1 is present in:
   - All patients with PV diagnosed per the PVSG or newer WHO criteria.
   - Half of patients with a clinical diagnosis of ET who form endogenous erythroid      colonies.
   - Half of patients with IMF who form endogenous erythroid colonies.
   - ICU patients with severe sepsis.

· PRV1 is not present in:
   - Patients who do not form endogenous erythroid colonies. Due to this 100%      correlation, the quantitative RT-PCR assay renders colony-forming assays      unnecessary in patients meeting clinical criteria for diagnosis.
   - Patients with secondary erythrocytosis or reactive thrombocythemia.
   - Patients with CML.

· The German Society of Internal Medicine, in its new guidelines published at end of   March 2002, has recommended the following:
   - Patients with suspected myeloproliferative disorder should be tested for their      status of PRV1 expression.
   - A diagnosis of PV should only be given to patients positive for the over      expression of the PRV1 marker.

· Dr. Pahl invited American investigators to reproduce the German results in future   U.S. trials (Dr. Prchal has done this).

· Dr. Pahl stressed that PRV1 is a convenient surrogate marker for diagnosis and   useful epiphenomeonon, not the molecular aberration leading to the disease.

· Italian study finding that 100% of ET patients also overexpressed PRV1 could not   distinguish between positive and negative because it did not use quantitative
  RT-PCR.

· Dr. H. Phillip Koeffler explained how the PRV1 marker was detected:
   - Nanogram scale analysis was used, due to the paucity of mRNA, on CD34+      cells purified from patients with agnogenic myeloid metaplasia (AMM) and      counterpart cells purified from normal patients. Confirmation analysis is being      done using real-time RT-PCR
   - Cell populations in addition to CD34 are being considered for gene chip analysis.

· Dr. Pahl explained her group's theory, now being tested, on what is happening to   the PRV1 protein:
   - Hypothesis: More PRV1 protein is formed in patients over expressing the PRV1      mRNA; but the protein is soluble and thus is not inserted in the membrane,      already full of protein.
   - Theory is based on:
       * Dr. Stroncek's work showing that PRV1 and NB1 CD177 are in fact the same          antigen.
       * NB1 CD177 is likely soluble, since it can cross the placenta (demonstrated          by formation of anti-NB1 antibodies by NB1- mothers of NB1+ children).

· One expert cautioned that PRV1 is the same in PV progenitors and normal   progenitors, and after all the disease starts in stem cells/progenitors.

DISEASE CLASSIFICATION VIA MICROARRAY IN THE MPDS

· Existing MPD assays are not specific enough.

· Recommendations:
   - Dr. Valent and Tefferi urged the development of highly specific assays for      diagnosing the MPDs.
   - Since most cells are maturing cells with no obvious malignant markers, it would      probably be best to isolate cells in the bone marrow, not peripheral blood. (Dr.      Bennett)
   - Dr. Tefferi proposed that a prospective study should be done by the Cooperative      Groups using innovative microarray analysis to arrive at a more precise,      molecular classification of these now crudely classified diseases.
   - Dr. Valent agreed, stressing that a panel of antibodies and genes/gene products      will likely be what is needed to define the type of diseases and various prognostic      subgroups precisely. Precise classification will likely not be based on a single      marker.
   - Dr. Pahl agreed that such a national initiative would be a good idea.
   - Dr. Tefferi urged that, in order to obtain sufficient mRNA for analysis, we must      focus on easily accessible tissue, such as the granulocytes, to gather enough      cells, and improve our nanogram scale analysis ability.
   - Dr. Valent questioned the specificity of using the number of peripheral CD34+      cells for diagnosing MF in Ph- chronic MPDs patients, since polyclonal patients      with MF also have a large number of CD34.
   - Dr. Bennett urged that distinguishing differences in molecular abnormalities      within the MPDs is more important than contrasting normal vs. abnormal (e.g.,      Ohio State study finding huge differences in gene array patterns between trisomy      8 and non-trisomy 8 AML).
   - Dr. Bennett suggested developing guidelines to establish a separate Cooperative      Group focusing on either individual MPDs or selected MPDs.
       * Group would develop its own studies and export them through mechanisms          that now exist like the CTSU.
       * Or, we could go directly to one or more of Cooperative Groups to solicit          advice.

· Current, promising analyses using gene chip/microarray:
   - Gene chip studies looking at 5,000-20,000 different genes are demonstrating      major differences between AML and MDS. They are using whole-cell lysates,      rather than just CD34. (Dr. Bennett)
   - Oligonucleotide microarray analysis is being applied to neutrophils of MPD      patients. (Dr. Tefferi)
   - We have used granulocytes and cDNA chips of 12,000 cDNAs, complementing      Dr. Tefferi's work with oligonucleotides. (Dr. Pahl)
   - Microarray analysis in lymphoma has shown some promise. (Dr. Tefferi)

· Dr. Koeffler addressed our ability to examine CD34+ cells using nanogram scale   technology:
   - It is fair - not great.
   - Nanogram scale technology is not as effective as using the typical, regular scale.
   - But nanogram scale technology it is better than a lot of other techniques, such      as RDA, whose yields are low.
     - Amount of mRNA is important.
       * Typically, you label 7-10 mg of RNA to create and label the cDNA.
       * We are currently using 500 ng, which requires two rounds of amplification.
       * With our little amount of mRNA, our hit rate is about 60%, not bad.
       * With a large amount of RNA, your hit rate is higher: Using the regular-scale,          you'd have hit rate of 80%.
   - Use of real-time RT-PCR in nanogram scale technique is important.
       * Verifying your hits using real-time RT-PCR is very important, since what          amplified well during the first round of amplification will amplify even better          during the second round.
       * After setting the criteria of what to amplify, making it fairly robust, you perform          real-time RT-PCR, confirming what you saw in chip.

· Dr. Bennett reminded participants of material not yet covered in etiology and   pathology:
   - Thrombopoietin
   - PPO
   - Vascular growth factors

PURPOSE OF MEETING REVISITED

· Question: Dr. Silver asked Dr. Cheson about the purpose of the meeting, NCI's   sudden interest in the MPDs and the fiscal feasibility of the proposals heard this   morning.
   - Response: Dr. Cheson replied that the NCI's position is that:
       * Cooperative Group leukemia chairs felt the myeloproliferative disorders were          underserved since termination of the PVSG.
       * The objective of this meeting is to arrive at a series of action items, the          realistic ones of which NCI will do its best to see implemented.
       * Studies resulting from this meeting may have to be performed in conjunction          with NHLBI.

ETIOLOGY BEFORE THERAPY?

Dr. Bennett asked if studies on the etiology of the MPDs were warranted, and, if so, how should they be accomplished? Debate then ensued on whether emphasis should be placed on elucidating etiology first, or determining therapy.

· Arguments against strongly focusing on etiology:
   - Dr. Silver urged that epidemiology is as important as etiology, stressing that the      epidemiology of the MPDs has never been looked into systematically.
   - Drs. Gordon Dewald and Tefferi agreed that we do not necessarily need to know      the exact etiology to attack the MPDs. What is important is to identify,      particularly with genomic studies, pathways that can be altered with novel     therapeutics, perhaps small molecules.
   - One clinician in attendance warned that if we wait to find etiology of disorders, we      are not doing service to patients. Physicians and patients very frustrated by      absence of data on how to treat MPD patients. There has never been a trial in      MPD focusing on how best to treat.

· Arguments for focusing on etiology:
   - Before any progress is made, we must agree on a databank to be made available      to basic investigators. There is no point in investing money in therapeutic trials      when we do not know what the disease is.
   - The major focus should be on attempting to define molecular defects. Besides      mastocytosis, we do not have any molecular targets for therapy development.      (Dr. Valent)

· Argument resolved by comments from Drs. Bennett and Prchal:
   - The beauty of Cooperative Group trials is that they allow examination of      epidemiology, etiology, and molecular at the same time they seek to determine      which therapies are best.
   - This simultaneous study of therapy and natural history through Cooperative      Group trials is a point that should be emphasized with NCI.

· Comment: We should get away from the term "orphan" disease. The incidence of   PV is actually greater than CML.
   - Rebuttal: The term "orphan" is useful for fast-tracking new agents through FDA      bureaucracy. Furthermore, the incidence or prevalence of any of the MPDs is      unknown, and can only be determined through well-designed studies. (Dr.      Bennett)


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