SLIDES & TRANSCRIPTS
APRIL 29, 2002

Breakout Session B:
Abnormal Signaling/Cytokines

Cynthia E. Dunbar, MD
Scott Kaufmann, MD, Ph.Dr

Session agenda and rationale:

 

· Purpose: Review each of the myeloproliferative diseases and address issues   related to abnormal signaling and cytokine mediated events

· Challenge: To collectively identify what is known about signaling in these diseases   and where gaps are in our knowledge
· Questions to address for each disease
   - #1: What is the hard evidence that abnormal signaling contributes to abnormal      pathophysiology in myeloproliferative and mast cell disorders?
       * MPDs are considered diseases of abnormal signaling, but for each, ask,          "Does abnormal signaling contribute?" - from literature and participant insight
       * If no evidence, how can it be established that abnormal signaling contributes?
   - #2: If there is evidence that abnormal signaling contributes, how can the nature of      these signaling abnormalities be established?
   - #3: What are the therapeutic implications?
   - #4: What are the resources needed to answer these questions in these rare      disorders?
       * How can clinical resources be pooled to evaluate signaling pathways?
       * Identification of compounds and pathways in terms of therapeutic          implications?

MAST CELL PROLIFERATIVE DISORDERS (MASTOCYTOSIS) (DR. KAUFMANN)

· Evidence of abnormal pathophysiology
   - Strongest evidence of abnormality
       * c-kit mutations occur in malignant mast cell lines
       * c-kit mutations also occur in human clinical samples
       * If mutations are introduced artificially into cell lines, result is ligand          independent signaling through the c-kit receptor
   - 2 types of c-kit mutations
       * Juxtamembrane mutation (regulatory mutation)
       * Activation loop or enzyme-pocket reactivation mutation

· Establishing the nature of signaling abnormalities
   - Downstream of these mutations
       * Activated c-kit activates PI3-kinase AKT survival pathway and SRC pathway
       * AKT and SRC are well known anti-apoptotic pro-proliferative pathways
       * Supporting evidence in models and mast cells from knock-out mice where          activated c-kit is anti-apoptotic and pro-proliferative

· Therapeutic implications
   - STI571 and similar compounds - inhibitor of c-kit
   - Recent publication - activation loop(D816Y) c-kit mutants are resistant to STI571
   - Memorial investigators divide c-kit into mutants in regulatory domain (sensitive to      STI571 and mutants in activation loop (enzyme-active site; resistant to STI571)
   - Activation loop c-kit mutation similar to STI571-resistant CML and ALL at relapse    - pharmacology of STI571 (binds to inactive conformation of BCR/ABL and c-kit)
   - Implications
       * not every c-kit mutation is same
       * need other c-kit inhibitors, especially to inhibit D816Y

· Resources needed to answer questions
   - How to screen other inhibitors/mutations and bring to clinical trials for      investigation? (In cell lines? In transfected cells? In clinical material?)

· Discussion
   - What to do now that the lesion is known?
   - Are c-kit mutations found in 98% of mast cell disorders or only a smaller      percentage - Should the possibility of other mutations in the same pathways be      assessed?
   - Similar seminoma study (Dr. Murgo) - (AACR abstract/Oregon Health &      Sciences Univ.)
       * patients with seminoma have mutations similar to mast cell disease
       * evaluated large panel of specimens of seminoma and identified mutation
       * transfected cells with mutation and tested cells for sensitivity for STI571
       * data in seminoma similar to mast cell disease - majority of activating          mutations only occurred in 25%; majority of mutations identified were relatively          resistant to STI571
       * benefit - model screens relatively large number of samples, identifies          mutations, and then evaluates for sensitivity to drugs like STI571
   - Technique at Memorial (Dr. Kaufmann) - tested c-kit mutations by placing in      COS cells and observe for inhibited autophosphorylation
   - Another technique (Dr. Dunbar) - place mutations in factor-dependent      hematopoietic cell line (e.g., BAF3) - observe to see if inhibitor prevents      factor- independent growth
     (similar study done by Dr. Gilliland in CMML with tyrosine-kinase activating      mutations)
   - C-kit mutations in BAF3 cells were not inhibited by STI571
   - Are any other inhibitors in development active against these mutations?
      * Dr. Gilliland -uncertain activity against D816Y
        · What percentage of mastocytosis patients harbor the c-kit mutation?
        · Assumption that c-kit present in mastocytosis close to 100%
        · Of those with c-kit, what proportion have D816Y? majority of cases?
        · Need compound that inhibits D816Y to treat mastocytosis

        · Mutation is identified - How to find inhibitors to target D816Y?
   - Screening with other inhibitors for D816Y inhibition? (Dr. Gilliland)
   - Compounds from Milennium and Sugen which hit wild-type kit and GIST      mutations might be worth testing against D816Y

CHRONIC MYELOMONOCYTIC LEUKEMIA (CMML) (DR. DUNBAR)

· Evidence of abnormal pathophysiology
   - Initially classified as a myelodysplastic syndrome, but WHO recently reclassified      CMML as an overlap syndrome (borderline/MPD)
   - Review of recent large study -
       * Measured median survival - median survival 12 months
       * Analyzed prognostic score (by MD Anderson)
       * No clear separation of cases with or without dysplastic changes in marrow          pathology (1/3 dysplastic; 2/3 proliferative)
       * Traditional prognostic indicators - monocytosis, rule out BCR/ABL, <20%          blasts
       * Most had informative cytogenetics, but none had cytogenetics suggestive of          PDGF receptor or fusion oncogene (unlike mastocytosis with mutations          present in majority)
       * Identification by cytogenetics is much smaller group
   - Possible mutations - c-kit and PDGF-beta receptor, others possible
   - Other Potential Abnormal Signaling Pathways in CMML
       * C-FMS mutations in MDS/CMML
       * Patient mutations at 301 or 969 - tyrosine kinase activation
       * 110 pts with MDS/AML
       * 12.7% of 969 mutations, 1.8% with 301 mutations
       * 20% of patients with CMML
       * Higher frequency of transformation to AML in follow-up study

· Establishing the nature of signaling abnormalities
   - Fusion oncogene in CMML identified with translocated TEL to PDGF-beta      receptor (Dr. Gilliland) (similar activating mutation of tyrosine kinase with      BCR/ABL)
        * PDGF-beta receptor present in CMML : fusion partners : TEL, HIP, Rabaptin          dimerize and activate the PDGF-beta receptor
       * Analysis ongoing - what partner fusion proteins are involved? do partner fusion          proteins confer special characteristics for patients? - little clinical data
   - CMML case (Dr. Dunbar) - cloned fusion protein from patient with non-dysplastic,      proliferative, undifferentiated CMML (BCR/ABL negative, 5:17 translocation)
       * compared sensitivity of fusion oncogene to STI571 vs. BCR/ABL - fusion          oncogene more highly sensitive than BCR/ABL
       * case history - early allogeneic transplant - cytogenetically negative 12 months    - transcripts began to reoccur at 15 months with GVHD - STI571 treatment given      and transcripts disappeared - sustained remission
   - HIP/PDGF-R translocation (Dr. Melo): - one typical TEL/PDGF mutation; one      with unknown partner; no transplant - complete cytogenetic remission >14     months with STI571
   - Where CMML lacks other therapeutic alternatives, provide justification to develop      Phase II trial to evaluate response to STI571
        * One Phase II trial currently in myelofibrosis includes CMML
        * Could STI571 work in the absence of PDGF receptor fusion? (Dr. Gilliland)
        * Could an activated receptor fail to be detected by conventional cytogenetics?           (Dr. Dunbar) - suggest a large-scale FISH trial or other screening
        * Would other activated tyrosine kinases cause the same phenotype? Is this           the default pathway in a primitive myeloid progenitor that causes an activating           mutation in a tyrosine kinase?
        * Mayo trial using STI571 in CMML was closed prematurely(Dr. Kaufmann)
          due to fatal splenic rupture. These patients did not have translocation, no           response to STI571
          · Caution against opening a trial unless there was evidence for this              translocation
          · Heterogeneity in signaling may produce syndromes looking exactly the              same
          · Potential causal relationship with STI571 - splenic rupture not seen in              patients who did not receive STI571
          · Questions -

          · Were patients on erythropoietin? (Dr. Spivak) - Experience with splenic              rupture in CMML patient with erythropoietin - spleen can enlarge rapidly

       * Getting requests to use STI571 in patients without cytogenetic abnormality          (Dr. Gilliland) - currently no recommendation - offering to sequence the PDGF,          kit, and SH3 domain of ABL as known targets
         · Clinical response in case at Baylor where activating mutation not identified             after sequencing the entire receptor and SH3
         · Screen thoroughly and use caution - should not preclude treatment with             tyrosine kinase inhibitors in patients without known activating mutations (by             cytogenetics or point mutations) - some remarkable responses seen
         · HES study has shown good response in 5 of 5 patients - signaling defect is             not known but therapy is successful (Lancet, 2002)
   - Publication on C-FMS in CMML in early 1990s - was this confirmed? (Dr.      Dunbar)
       * C-FMS studies used allele-specific priming ; subsequent studies could not          identify mutation with DNA sequencing (Dr. Gilliland)

   - Is peripheral blood or marrow being sequenced? Differences? (Dr. Magnuson)
       * Possible lineage-specific expansion (but broad-spectrum myeloid expansion          in CMML)
       * Is it sufficient to sequence bone marrow?
       * No known evidence for disparity between bone marrow versus blood in          sequencing results (Dr. Gilliland)
         · peripheral blood is reasonable target for sequencing
         · most patients have leukocytosis and monocytosis in peripheral blood
         · strongly advocate sequencing all exons of c- kit, PDGF-beta receptor,             PDGF-alpha receptor, and SH3 of ABL
       * Is there evidence that all myeloid lineages are clonal in CMML - in the          megakaryocytic line? (Dr. Prchal)
         · some cytogenetic evidence - published study on MDS patients that included             some CMML found that megakaryocytes were involved (Dr. Gilliland)
         · question of whether cells are part of the clone - compared to             hypereosinophilic syndromes where investigators asked if eosinophils             themselves were part of the clone (Dr. Dunbar)
         · similar issue in array technology for expression of proteomics where it is             sometimes difficult to identify the most relevant cell population related to             expression - CMML is similar problem due to wide heterogeneity of             expansion in different compartments
   - Another Potential Screening Alternative for STI571 Trials (Dr. Melo) - Novartis      "basket protocol" in Europe screening candidates who potentially benefit from      STI571 therapy
       * Trial includes any malignancy where kit or PDGF receptor mutation is          suspected
       * Patients must have positive confirmation of a mutation sensitive to STI571 or,          without a mutation, have confirmation for sensitivity of cells to STI571 in vitro
       * Hammersmith has two assays for cells culture to treat cells in vitro with          STI571 to look for response as an indication that there will be in vivo response
       * Clinical responses parallel positive in vitro responses, particularly in patients          who appear to have potential PDGF receptor involvement, but no confirmation
       * Results could provide definitive evidence that other receptors are STI-sensitive    - also similar indications from HES patient data (Dr. Gilliland)
   - Clarify concept behind "basket protocol" - Is STI571 targeting fibrosis at the      PDGF receptor expressed as a wild-type receptor in stromal elements? (Dr.      Gilliland)
       * Interest/Consideration from trial examples (Dr. Gilliland)
         · Over-expression of wild-type kit or PDGF receptors do not render the cells             dependent on those receptors for survival
         · Only cells that have activating mutations seem to be addicted to the             presence of the receptor - why?
         · Why are cells induced into apoptotic cell death when the PDGF receptor is             turned off? All other receptors are presumably normal (in the cytokines, in             the milieu, etc.)?
         · Support for in vivo experiment - some responses could be seen in patients             only over-expressing the wild type receptor vs. excluding patients just based             on sequence analysis
   - Regarding STI571 targeting fibrosis - Is an ongoing trial examining an anti-PDGF      agent stopping fibrosis? (Dr. Spivak)
       * Mouse model with over-expression of PDGF - fibrosis not part of that          syndrome
       * No known evidence that PDGF is involved in fibrosis - is there new evidence?
       * Monocytes generally thought to be involved in creating fibrosis in MPDs
       * STI571 may hit another receptor which affects fibrosis, but PDGF unlikely
       * New phase II STI571 study for myeloid metaplasia and CMML (University of          Chicago, Dr. Gilliland) - primary endpoints is clinical response, changes in          fibrosis will also be an endpoint
       * Study does not directly examine relationship of PDGF expression and fibrosis

AGNOGENIC MYELOFIBROSIS/MYELOID METAPLASIA (MMM) (DR. KAUFMANN)

· Identify the questions for myelofibrosis and signaling based on earlier commentary
   - controversy as to the potential role of PDGF - or no evidence of a role for PDGF?

· Evidence of abnormal pathophysiology
   - Proposed pathogenesis of myelofibrosis
     * Signaling disorder involving PDGF, TGF-beta, basic fibroblast growth factor        (bFGF)
     * Possible clonal megakaryocyte proliferation or clonal monocyte/histiocyte        proliferation - generates cytokine "storm" of neoangiogenesis, osteosclerosis        and reactive fibrosis
   - Fibroblasts are polyclonal; myeloid precursors are clonal
   - Consequently bone and fibroblast reactions are reactive
       * PDGF and TGF-beta are fibrogenic and both produced by platelets
       * possible that megakaryocytes and platelets are contributing to fibrosis
       * French article published showing elevated platelet levels of PDGF and          TGF- beta in myelofibrosis
   - Other Molecules Implicated
       * Forced thrombopoietin (TPO) over-expression in bone marrow cells
         · Leads to initial elevation of platelets and neutrophils
         · Marrow fibrosis, osteosclerosis, and extramedullary hematopoiesis follow
         · In animal model, initially looks like ET and ultimately looks like post-ET             fibrosis with elevated PDGF and TGF-beta
       * Why are fibrogenic cytokine levels elevated? - Are they truly elevated?
       * One report of response to TGF-beta was biphasic - high levels of TGF-beta are          thought to inhibit marrow fibroblasts rather than stimulate
       * Is there possible abnormal signaling by fibrogenic cytokines?
         · Disorder where there is guilt by association
         · How to establish whether this is a signaling disorder?
         · How to establish which cytokines are involved?
         · How to target those cytokines? - not to just blindly inhibit PDGF, TGF-beta             or TNF-alpha (also implicated)
   - Classic patients with myelofibrosis often have end-stage disease upon      presentation with degradation of many pathways (Dr. Spivak)
      * Present with massive spleen and highly fibrotic bone marrow
      * Cannot identify where disease started
      * Need to develop ability to diagnose patients in earlier stage to identify markers
        · Pathology data from Dr. Thiele - recognition of "hyperproliferative stage" of            idiopathic myelofibrosis - namely seeing it before significant fibrosis
   - Guilt by association caused by other processes following initial disease process
   - Association path, not causality
     * See PDGF, TGF-beta and TNF-alpha - these can cause stimulated fibroblasts -        assume causality - Causality not established
     * Model evidence
       · Non-Skid mouse model - fibrosis not possible because of a monocyte defect
       · Skid mouse - can create fibrogenic effect in presence of monocytes
       · Recent data showing that monocytes are central to the process
       · Data shows TGF-beta may be central to the process
     * Why do some patients with idiopathic myelofibrosis and other myeloproliferative        disorders get fibrosis?
       · Cases where patients have millions of platelets for decades without any           fibrosis vs. published cases of ITP and lupus patients with severe fibrosis
     * Thrombopoietin data fascinating - can create reversible fibrosis with TPO - one        mechanism, are there others? Some other models have not seen elevated        TGF- beta or PDGF-beta with elevated TPO
   - Focus on fibrosis not useful for abnormal signaling and cytokines (Dr. Dunbar)
     * fibrosis too variable, an end-stage clinical problem
     * underlying problems - myeloproliferation and clonal hematopoiesis
     * must identify the molecular defects first; then approach them therapeutically
     * obstacles
       · no clear animal model
       · difficult to get cytogenetics because many patients are not aspirable

· Refocus discussion (Dr. Kaufmann)
   - Is there agreement that idiopathic myelofibrosis (or MMM) is a clonal disorders?      If agreed, what is the nature of that clone? How does it give rise to fibrosis?
     * Evidence of clonal disorder - clonality shown using classical informative female        for isoenzymes of G6PD (Dr. Spivak)
     * Possibly polyclonal myelopoiesis, but that is probably secondary myelofibrosis        (Dr. Prchal)
     * Few patients analyzed - clearly evidence for some clonal myelopoiesis but also        possibility for polyclonal myelopoiesis in larger numbers (Dr. Gilliland)
     * Animal models support possibility that fibrosis is variable in apparently the        same phenotypic disease - disconnect CMML phenotypes from fibrosis (Dr.        Gilliland)
       · most phenotypes have high levels of megakaryocytes like TPO           over-   expression
       · all result in megakaryopoiesis and fibrosis
       · animal model where BID (a BH3 only pro-apoptotic gene) is deleted - result is           a disease that looks exactly like CMML but the animals never develop fibrosis
     * Re-emphasize - not enough trials to tell if all patients have the same clonal level    - might some patients have clones that arise in more mature states? (Dr. Spivak)
     * No consistent cytogenetic abnormality or chromosome abnormalities seen in        these patients - some evidence for 12q, 5q, etc. (Dr. Kaufmann)

· Resources needed to answer questions
   - Possible recommendations (Dr. Kaufmann)
     * Cooperative Groups or form large consortium to start collection of material
       · Should criteria include confirmation of clonality for material to be allowed to go           into the bank to be studied?
       · What should the material be studied for?
   - Using 5 informative markers, we have success in 90% of females; study platelets      and granulocytes using a transcription clonal assay (Dr. Prchal)
   - Base Banking Criteria on Clinical Diagnostic Criteria (Dr. Spivak)
     * Avoid targeting one chromosomal abnormality since this disease has vast        heterogeneity
     * First identify clinical diagnostic criteria for idiopathic myelofibrosis
       · #1 - splenomegaly - whether presenting with a massive spleen in fibrosis or          with no discernible symptoms which in a few years develops fibrosis
      · 95% of patients have splenomegaly - would the other 5% that present with          fibrosis without splenomegaly, have the same chromosomal abnormality?
      · #2 - fibrosis present in the marrow
      · #3 - blood count abnormality
      · variable - in red cells, white cells or platelets
      · generally anemic; generally have leukocytosis or thrombocytosis
      · maybe pancytopenia
    * Other criteria available include an Italian consensus group
    * Need to agree on clinical criteria before we start banking material - need to       clearly characterize the disease
   - Propose creating an inclusive national registry (Dr. Spivak)
     * The myeloproliferative disorders are rare, and myelofibrosis the least common
     * NCI has now recognized MPDs as neoplasms because they are clonal
     * Need to raise general awareness to learn more about the disease - clarify        diagnostic criteria, identify early disease stages
     * Need a large cooperative group before discussing what to measure
   - Suggest collecting bulk specimens using very broad criteria (Dr. Gilliland)
     * Be more inclusive than exclusive
     * Only low numbers of chromosomal translocations
     * Use bank to determine disease groups - use broadest criteria, do clonal        analysis, and analyze to separate into different groups
     * Regardless of pathophysiology, gain knowledge on disease by banking        samples; by getting patients registered on clinical protocols to get those        samples
     * Genetically challenging - known cytogenetics are almost exclusively deletions
     * Not enough of material to even do careful deletional mapping on 5q
     * Use bank to apply modern strategies like high through-put sequencing of        kinases - doable using chip based strategies
     * Critical to characterize specimens to know they are clonally derived - often        difficult aspiration, not always sure if cells are clonally derived (Dr. Gilliland)
   - In bank, include a patient's therapeutic responses to agents - even if the reasons      for response are unclear, this information may help to define the disease Is this      group proposing that a bank be established and/or funded through NCI?      Guidance for the plenary session? (Dr. Kaufmann)
     * Recommendation should address both NCI and NHLBI (Dr. Wu)
     * Support a bank, but need to agree on what tissues to bank (Dr. Prchal)
     * Would fresh samples be needed for clonal analyses discussed? (Dr. Dunbar)
     * Samples can be frozen if platelets and granulocytes are isolated, or monoclonal        cells (Dr. Prchal)
   - Banking vs. clinical trial: Experience from GIST (Dr. Murgo)
     * GIST - little known before successful treatment identified (STI571) - raised        interest among researchers, clinicians and lay - internet promoted        communication among patients
     * Banking initiated within context of Intergroup clinical trial (SWOG led; CALGB        coordinated correlative studies and banking) - intense correlative study to        collect  samples and to look at types of correlates to try to identify        characteristics which      were associated with outcome
     * Key - needed a trial as basis by which samples were collected
     * Reason STI571 tested in GIST - kit mutations were known - rationale for testing        established because biology was done beforehand - for MPDs, need to get        enough samples to understand the biology of idiopathic fibrosis (Dr. Kaufmann)
     * Wild type kit also found to respond to STI571 in proportion of patients - not        appreciated before trial - similar discussions occurring for wild type PDGF - but        the major interest in GIST came about after this study (Dr. Murgo)
   - Establishing a national bank - not through clinical trials (Dr. Spivak)
     * Successful treatment for MF may be a long time coming
     * Need a mechanism to set up a tissue bank (maybe through RFP/R3)
     * Bank samples must be made available to other investigators (for clonality        studies, sequencing, activating mutations)
     * Recent clinical trials have been unsuccessful (Enbril, STI571)
     * Need tissue to go back to basic science to find better options
     * Small patient population - need big Cooperative Group
       · Start a tissue repository to spawn scientist interest to study these diseases
       · Great ideas but few patients, need access to tissue
       · Ideas in the milieu - data available that CD34 positive cell population is greatly          expanded in the peripheral blood - easy to obtain - place to start
     * Rarity of patients - PV study group needed 20 institutions to get 431 patients        enrolled on their pivotal trial - in similar time frame, Mt. Sinai had 200 PV        patients but only about 40 myelofibrosis patients - MF patients had great        diversity in presentation (Dr. Fruchtman)
     * Need national attempt to get Cooperative Group studies with enough patients
       · Recognize genetic and phenotypic diversity to all these patients
       · Weakness of recent trials - to draw conclusions about efficacy of novel agents           with only 10 patients on trial
       · Take national approach to acquire patients for both banking and therapeutic           trials
   - Need to collect specimens prior to therapy and after response to therapy (Dr.      Zeldis)
     * Best responses in current trials have had 20% to 30% response
     * What happened to the other 70%?
     * If therapeutic response helps to define the disease, do the rest have another        disease?
   - Interaction with patient support group organizations may prove helpful (Dr. Prchal)
     * Patients are interested - valuable; anxious to interact; willing to participate in        tissue banking and studies
    * For the very rare disorders, even a Cooperative Groups may be unsuccessful -       need broader participation - interact through these patient organizations
    * The Myelofibrosis Foundation may be able to help in setting up the bank (Dr.       Kaufmann)
   - Is successful accrual to a cooperative tissue bank a reasonable expectation in      the absence of a clinical trial? (Dr. Gilliland)
     * Considerable effort via trials to collect samples at independent institution
     * Is there willingness to send those samples to a central bank and have them        accessible through committees?
     * Would it work better under the auspices of a trial where correlative science        studies could be more easily facilitated?
   - Create the bank outside of trials (Dr. Spivak)
     * Trials are attractive because they draw patients interested in being treated -        little definitive knowledge to apply to a trial
     * Trial design usually requires narrowing patient selection for treatment-specific        goals, need the bank to represent widely inclusive disease population - these        diseases have only some clinical definitions; heterogeneity
     * Tissue bank independently to start - use trials to get more patients if necessary
     * Bank is essential to attract basic scientists - meet their needs
       · Need access to tissue repeatedly
       · Need funding to support these studies
     * Need government support (e.g., identify that MPDs are more frequent than        CML, intention to improve quality of life for these patients)
   - Would institutions be willing to contribute collected samples to a central bank?      (Dr. Gilliland)
     * Dr. Spivak supported this for his samples - benefits to contributing samples to a        national bank is receiving other samples back - works both ways - win-win
   - Logistical point on patient consent and IRBs (Dr. Prchal)
     * More regulatory controls involved to do research now than 5-10 years ago
     * Interacted initially with a physician in Ohio to identify a patient, IRB regulations        required all subsequent communication be made only with the patient directly -         obtained consent but was not permitted to contact the physician for clinical        information
     * Difficult to get approval for interaction with other institutions even for rare        disorders - each institution would need IRB approval from their own IRB as well        as coordinating IRB
     * HIPAA regulations require that samples be stripped of personal identifiers, but        can include some clinical information (not traceable back to the patient) without        problems for IRB approval
   - NHLBI has tissue bank core resources where large number of tissues are banked      from trials which NHLBI is running - subcontractor relationship - allows for      storage and shipment of specimens (Dr. Wu)
     * Might be feasible to design a collaboration between NHLBI and NCI for accruing         patients with storage and shipment of specimens through NHLBI
     * Banked specimen data needs to include response to various therapies - would        need to collect patient specimen consent prospectively so research can be        done on specimens to look at responses to specific treatments without        requiring additional consent on those samples - need to plan this ahead (Dr.        Kaufmann)

POLYCYTHEMIA VERA (PV) (DR. DUNBAR)

· Evidence of abnormal pathophysiology
   - Clonally characterized in erythrocytes, granulocytes and platelets
   - Erythroprogenitors are hypersensitive to erythropoietin (EPO) and cytokines      present in serum
   - In acquired PV, no evidence that binding or the EPO receptor itself are abnormal
   - Only mutations in EPO receptor found are in familial erythrocytosis, but not in      myeloproliferative type PV

· Establishing the nature of signaling abnormalities
   - Focus of Dr. Spivak's research - c-MPL/thrombopoietic (TPO) interactions
     * Overexpression of TPO resulting in fibrosis and extramedullary hematopoiesis
     * Ectopic c-MPL can cause erythroblastosis in certain models - published data
       · Abnormalities in protein phosphorylation in response to TPO in PV
       · Decreased c-MPL expression in platelets
       · Are there any new theories or new data on how this relates to          pathophysiology? How could this be translated into new therapies?
     * Mutant EPO - potential treatment for primary and secondary erythrocytosis
       · R301 erythropoietin: partial agonist/antagonist
       · Inhibits proliferation but allows differentiation in cell line models
       · Mechanisms not completely clear - animal model testing
     * PV and c-MPL - impaired glycosylation not understood, but present in        CD34-    positive cells - these cells have growth advantage over normal cells in        vitro - sensitive to IL-3 unlike normal CD34 positive cells (Dr. Spivak)
       · In signal transduction, difficult to find tyrosine phosphorylation in these cells
       · Not finished with studies on phosphatase inhibitors
       · Occasional single abnormal protein phosphorylated in some patients
       · In CD34-positive cells, hypo-tyrosine phosphorylation present; occasionally a          very specific, unidentified protein is phosphorylated
       · Signal transduction abnormalities present
       · Taken under glycosylated MPL and express it in an IL-3 dependent cell line          and get same signal transduction abnormalities
       · Reproducible - tracks with disease, but not able to determine if related to          pathophysiology of disease
     * PV cells are sensitive to all the growth factors that control normal        hematopoiesis - Any attempt to treat with an anti-EPO might be symptomatic        treatment but does not target the heart of the disease - agreed with Dr. Prchal        and others
     * What does it mean in terms of signaling pathways if patients are hypersensitive        to EPO or IGF1? - Is the defect then downstream (at global PI3 kinase or        others)? (Dr. Kaufmann)
         · Compensatory effect (Dr. Spivak)
         · When one receptor is not working, other receptors take over its place
         · Some inhibitory pathways not up-regulated normally because receptor signal             is not as strong as it might otherwise be
         · Similar to idiopathic myelofibrosis - intriguing clues but no smoking gun
         · Same evidence in cytogenetics - evidence of some suppressor genes
         · Multiple things going on
         · Abnormalities appear to be downstream of primary lesion but primary event            not clearly identified (Dr. Prchal)

Cytogenetic approach looked at:
       · both clonal and polyclonal cells from the same individuals
       · various T-cells and myeloid cells
       · did comparative genome wide screening
       · also look for heterozygosity
       · due to time requirement only looked at 10 patients to date
       · 4 patients had heterozygosity in chromosomal region already extensively          sequenced, but found no mutation
       · Data on this same region - some gene messengers were up-regulated           (including NIFB, master regulator of many genes)
       · Logically, primary event may control many abnormalities
     * Follow-up on EPO (Dr. Prchal)
       · If bulk EPO and EPO receptor antibodies are added to erythroid-independent          clone in serum, normal bulk erythropoiesis but not PV erythropoiesis occurs
       · Logically, an EPO antagonist would not be beneficial
       · If several genes are activated by same abnormality - EPO agonist would also           fail to be beneficial
     * Heterogeneity of disease identified by PV Study Group criteria (Dr. Spivak)
        · Criteria does not define all patients at start of illness
        · Some only erythrocytosis, some erythrocytosis and thrombocytosis, small           minority with trilineage hyperplasia
        · Heterogeneous patient history - some long-term without problems, some with           abbreviated clinical course, some develop myelofibrosis, some present with           myelofibrosis with increasing red cell mass
       · Disease not monolithic - speaks for acquiring tissue from patients with           particular characteristics
     * Abnormality with loss of 9p looks to be very important (Dr. Spivak)
       · Found chromosomal lesions and non-chromosomal lesions (Dr. Prchal)
       · Found loss of heterozygosity which spanned wide region (40 centiMorgans);          not chromosomally visible
     * Other possibilities which might coincide with finding compensatory        mechanisms for a primary genetic defect (Dr. Gilliland)
       · Haploid gene dosage could be the only abnormality or a contributor
       · Possible strategy to look at haploid gene dosage using modeling in Zebra fish
       · How extensively has phosphatase deficiency been examined?
       · Usual popular phosphatases (7 or 8) were cloned out - all found to be normal
       · Found 1 phosphatase, which was not recognized initially, that was           hyper- expressed in PV - megakaryocyte phosphatase (megPTP)
       · Sequence is normal, but megPTP is hyperactive
       · May contribute to hematopoiesis again, but not the primary defect
       · Others available could be looked at, but usual methods to choose tyrosine           phosphatases and cloning on that basis have not revealed anything to date

JUVENILE MYELOMONOCYTIC LEUKEMIA (JMML) (DR. EMMANUEL)

· Evidence of abnormal pathophysiology
   - More known about disease signaling
   - BCR/ABL negative myelomonocytic leukemia (MML) in children
   - Most present at less than 2 years of age with anemia hemorrhage, skin rash,      lymphadenopathy
   - Heterogeneous clinical course
   - Clinical and pathophysiology overlap
     * monosomy-7 syndrome hyper-responsive to GM-CSF
     * work by Dr. Kevin Shannon identifying genetic abnormalities from work on        neurofibromatosis

· Establishing the nature of signaling abnormalities
   - Activating ras mutations found in 30%, specific to those without      neurofibromatosis
   - NF1 - loss of normal NF1 allele in patients with JMML and neurofibromatosis
     * NF1 protein, neurofibronin (GTPase) that down-regulates ras-GTP
     * In normal situation, GM-CSF and other signaling pathways maintain ras-GTP in        inactive state
     * In JMML, neurofibromin influence changes of ras-GTP from inactive to active        (mouse model and patient data) - higher level of ras-GTP - hypersensitive to        GM-CSF signaling
     * NF1 heterozygous patients prone to myeloid leukemia with deletion of normal        allele
     * NF1 double (homozygous field progenitors) are hypersensitive to GM-CSF        (transplanted into wild-type mice, have phenotype similar to JMML)
     * 30% of JMML patients have NF1 mutations, 15% have clinically        neurofibromatosis
   - Stem cell disorder - appears in various myeloid lineages, including erythroid,      megakaryocytic, CD34+, CD38-, but conflicting data on B and T cells

· Therapeutic implications
   - Poor response to conventional chemotherapy
   - Allogeneic transplant is treatment of choice if donor available - high relapse rate -      40% disease free survival rate (in unrelated and matched siblings)
   - Retinoids and interferons attempted with early studies that were promising, but      not overall very good
   - Farnesyl transferase inhibitors - target once ras pathway identified
     * L-744832 (Merck) not effective in mice - only inhibits H-ras not N or K
     * L744749 (Merck) better in mice, but showed some inhibition of normal        progenitors
     * (Jansen)- R115777- a FTI being used by COG
   - Inhibition of GM-CSF
     * E21R, GM-CSF antagonist - effective in mouse model - binds alpha chain and        not the beta chain and blocks actual signaling
       · French case report of end-stage JMML with good response following 2 cycles           with E21R, but resistant after third cycle - possibly due to development of           antibody against E21R
       · Working with both British Biotech (U.K.) and Bresogen (Australia) developers           of E21R - developing IND, have pre-IND FDA meeting in June to open trials in           the United States - currently in Phase II trials outside of U.S. (Dr. Emanuel)
     * Synergy with anti-TNF-alpha monoclonal antibody
   - Clinical experimental pediatric trial in COG (Dr. Emanuel)
     * Phase II window/Phase III trial format (more detail in Innovative Therapy        session)
     * Experimental therapeutics tested in 2-month window up-front
     * Then patients proceed to treatment with multi-modality regimen of retinoids,        chemotherapy, splenectomy, and stem cell transplant
     * Experimental therapies include Jansen's R 115777- FTI (only 9 patients        currently enrolled, 8 received FTI)
     * In design, if response seen with FTIs, up to 36 patients will receive on        experimental phase II agent, and then move onto next stage of protocol
     * If trials opened with E21R in the U.S., it may replace FTI in the experimental        window
     * Blinded study - no major toxicities reported to date; masked to any response        data
     * What is dose of FTI triple seven in infants - start at 200 move to 300 if        acceptable side effect profile is seen, special powder packet formulation
     * Has the new GM-CSF conjugated immunotoxin used in adults with AML been        considered for this trial?
       · Yes, evaluated with Dr. Frankel - does have effectiveness in vitro
       · In early trials with GM-CSF diphtheria fusion toxin in adults, there was           significant hepatotoxicity - if this issue can be overcome, it could be           attempted in children
       · Currently, this is behind development of E21R for children
     * Banking being done with this protocol as well

· Discussion summary (Dr. Kaufmann)
   - Does JMML represent a successful plan which can be used for all the      myeloproliferative disorders?
     * In an extremely rare disease, signaling abnormalities are being fairly well        characterized
     * Through work in Cooperative Group, it has been possible to do innovative trials        based on signaling
   - JMML has some heterogeneity in molecular pathogenesis
     * As research progresses, review various molecules to figure out which had        impact on response
     * Current estimates for mutations from small series (Dr. Emanuel)
       · 20% with ras mutation
       · 30% with NF1
       · ras and NF1 are mutually exclusive
       · mutation in other 50% still to be characterized
       · evaluating which therapies have better/worse response in NF1 patients
       · correlative studies will also help answer remaining questions
   - Suspect similar challenges to identify mutations in other MPDs as in this      disorder (Dr. Gilliland)
     * At signaling level, hard to identify NF1 deficiency as consequence on ras-GTP        loading
     * Difficult to identify biochemical surrogates for activation of ras map kinase        pathway in heterozygotes
     * Data on ras wild-type allele - when expressed from its own promoter, as        opposed to over-expressing it, hard to demonstrate down-stream activations
   - Need to approach pathophysiology using multiple strategies including signal      transduction and direct sequencing of as many candidates genes as might      appear to be reasonable as a rational approach to solving these problems

ESSENTIAL THROMBOCYTOPENIA (ET) (DR. KAUFMANN)

· Similarity to other MPDs - present with thrombocytosis, then go on to fibrosis

· Consider ET as distinct entity with fibrosis as opposed to idiopathic myelofibrosis   where no clear mechanisms for pathogenesis were determined from earlier   discussion

· Evidence of abnormal pathophysiology
   - Forced thrombopoietin (TPO) over-expression in bone marrow cells - disease      initially manifests as elevated platelets and neutrophils (mouse model)
   - TPO mutations
     * Familial ET - Mutations in TPO gene found in splice junction or in 5 prime        untranslated region of mRNA - extremely rare syndrome (1-2% of ET cases)
     * Spontaneous ET - TPO levels reported normal
   - c-MPL mutation in TPO receptor
     * Lack of constitutive activation of c-MPL in ET - caveat reminder - very difficult to        demonstrate abnormal signaling even when thought to exist
     * Research experience has not found c-MPL mutations in TPO receptor
     * c-MPL levels often report to be normal or low, rather than elevated - not even        over-expression of a normal receptor that contributes to pathophysiology
   - Megakaryocyte colony growth (CFU-Meg)
     * Autonomous megakaryocyte colony growth (CFU-Meg) - question whether        CFU-Meg can be blocked by anti-TPO reagents - is it TPO responsive or not?
     * CFU-Meg reported as hypersensitive to IL-3 and PEG-rHu MGDF (a TPO        derivative or truncated TPO, which is pegalated megakaryocyte growth and        differentiation factor)
   - Is ET a heterogeneous group of diseases where the signaling defect has been      missed? Is ETa signaling disorder at all? (Dr. Kaufmann)
     * Heterogenous disorder - many factors turn platelet production on - no clonal        marker identified unless informative female program is used (Dr. Spivak)
     * Symptomatology and clinical history
       · acute patients - from high platelet count into myelofibrosis, enlarged spleen,           acute leukemia and death
       · chronic patients - 20 year history of high platelet counts where nothing more           significant happens (finger and toe pain, headache, bleeding)
     * Define clonality in ET patients - reduce heterogeneity of population
   - Nature of clonality
     * Originally ET thought to have clonal hematopoiesis
     * Research shows ET to have polyclonal hematopoeisis in substantial fraction of        patients - disorder where clonality is in question

· Establishing the nature of signaling abnormalities
   - Lack of c-MPL constitutive activation in ET
   - Hypersensitivity of CFU-Meg to IL-3 and PEG-rHu MGDF
   - Proposed Banking of Tissues (Dr. Kaufmann)
     * If specimens are banked, clonality must be established
     * Also work on platelet RNA expression which indicates that some ET patients        have clonality confined to the megakaryocyte compartment - interpretation of        available data (Dr. Gilliland)
     * If banking specimens, what is the best tissue to try to obtain?
       · Based on data from PV, bone marrow would have both clonal and non-clonal           populations (Dr. Spivak)
       · Theoretically if disease is clonal, then peripheral blood should only reflect the          malignant clone
       · Platelets are easy to collect
       · In ET patients, CD34 positive cell would be optimal, but hard to obtain without           IRB approval to allow larger volume quantities for blood draw
       · Might ET patients have mutations with later progenitors than a CD34           progenitor? Does every ET patient have a genetic lesion in their CD34 cells?           (Dr. Gilliland)
       · Since congenital one can be seen - no reason to say no on that basis (Dr.           Spivak)
     * Sytematic approach for signaling pathways (Dr. Emanuel)
       · Considering heterogeneity and difficulties with NF1 signaling, controversial           results should not be dismissed quickly
       · c-MPL activation not yet seen - develop more systematic approach
       · Examine cells showing TPO hypersensitivity in vitro - look carefully at those           signalling pathways - may be subsets to this disorder
       · Need to conduct study prospectively - discover TPO hypersensitivity two           weeks after receiving sample (Dr. Kaufmann)
       · Also conduct study sequentially - once first step is identified, obtain more          samples from those informative patients and look forward
   - Final Comment regarding Cooperative Group/organizing collection of tissues
     * Recommend formulating pilot treatment protocol central to Cooperative Group -        not rigid randomization procedure, flexible design to accommodate new        treatments - providing structure and assuring comparable results
     * Obtain specimens initially as well as throughout protocol treatment
       Ability to examine new treatments when good responses are observed or when        a particular abnormality is identified


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